3C5X image
Deposition Date 2008-02-01
Release Date 2008-04-08
Last Version Date 2024-11-13
Entry Detail
PDB ID:
3C5X
Keywords:
Title:
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at low pH
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.27
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope protein E
Chain IDs:A
Chain Length:402
Number of Molecules:1
Biological Source:Dengue virus 2 Thailand/16681/84
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:prM
Chain IDs:B (auth: C)
Chain Length:130
Number of Molecules:1
Biological Source:Dengue virus 2
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Primary Citation
The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science 319 1830 1834 (2008)
PMID: 18369147 DOI: 10.1126/science.1153263

Abstact

Many viruses go through a maturation step in the final stages of assembly before being transmitted to another host. The maturation process of flaviviruses is directed by the proteolytic cleavage of the precursor membrane protein (prM), turning inert virus into infectious particles. We have determined the 2.2 angstrom resolution crystal structure of a recombinant protein in which the dengue virus prM is linked to the envelope glycoprotein E. The structure represents the prM-E heterodimer and fits well into the cryo-electron microscopy density of immature virus at neutral pH. The pr peptide beta-barrel structure covers the fusion loop in E, preventing fusion with host cell membranes. The structure provides a basis for identifying the stages of its pH-directed conformational metamorphosis during maturation, ending with release of pr when budding from the host.

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Primary Citation of related structures