3C5M image
Deposition Date 2008-01-31
Release Date 2008-02-26
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3C5M
Keywords:
LYASE
Title:
Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199
Biological Source:
Source Organism:
Vibrio parahaemolyticus RIMD 2210633 (Taxon ID: 223926)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.60 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 3 2 1
3C5M validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Oligogalacturonate lyase
Gene (Uniprot):VPA0088
Chain IDs:A, B, C
Chain Length:396
Number of Molecules:3
Biological Source:Vibrio parahaemolyticus RIMD 2210633
UniProt ID:Q87K10 Pfam ID:PF14583
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
MN
Primary Citation
Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus.
To be Published ? ? ? (?)
Primary Citation of related structures
3C5M
Feedback Form
Name
Email
Institute
Feedback