3BXD image
Deposition Date 2008-01-13
Release Date 2008-02-05
Last Version Date 2023-08-30
Entry Detail
PDB ID:
3BXD
Keywords:
Title:
Crystal structure of Mouse Myo-inositol oxygenase (re-refined)
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:INOSITOL OXYGENASE
Gene (Uniprot):Miox
Chain IDs:A
Chain Length:289
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Structural and biophysical characterization of human myo-inositol oxygenase.
J.Biol.Chem. 283 15209 15216 (2008)
PMID: 18364358 DOI: 10.1074/jbc.M800348200

Abstact

Altered inositol metabolism is implicated in a number of diabetic complications. The first committed step in mammalian inositol catabolism is performed by myo-inositol oxygenase (MIOX), which catalyzes a unique four-electron dioxygen-dependent ring cleavage of myo-inositol to D-glucuronate. Here, we present the crystal structure of human MIOX in complex with myo-inosose-1 bound in a terminal mode to the MIOX diiron cluster site. Furthermore, from biochemical and biophysical results from N-terminal deletion mutagenesis we show that the N terminus is important, through coordination of a set of loops covering the active site, in shielding the active site during catalysis. EPR spectroscopy of the unliganded enzyme displays a two-component spectrum that we can relate to an open and a closed active site conformation. Furthermore, based on site-directed mutagenesis in combination with biochemical and biophysical data, we propose a novel role for Lys(127) in governing access to the diiron cluster.

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