3BUE image
Entry Detail
PDB ID:
3BUE
Title:
Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2008-01-02
Release Date:
2008-01-22
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.23
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Arginine repressor ArgR
Chain IDs:A, B, C, D, E, F
Chain Length:79
Number of Molecules:6
Biological Source:Mycobacterium tuberculosis
Primary Citation
Structure of the C-terminal domain of the arginine repressor protein from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D 64 950 956 (2008)
PMID: 18703843 DOI: 10.1107/S0907444908021513

Abstact

The Mycobacterium tuberculosis (Mtb) gene product encoded by open reading frame Rv1657 is an arginine repressor (ArgR). All genes involved in the L-arginine (hereafter arginine) biosynthetic pathway are essential for optimal growth of the Mtb pathogen, thus making MtbArgR a potential target for drug design. The C-terminal domains of arginine repressors (CArgR) participate in oligomerization and arginine binding. Several crystal forms of CArgR from Mtb (MtbCArgR) have been obtained. The X-ray crystal structures of MtbCArgR were determined at 1.85 A resolution with bound arginine and at 2.15 A resolution in the unliganded form. These structures show that six molecules of MtbCArgR are arranged into a hexamer having approximate 32 point symmetry that is formed from two trimers. The trimers rotate relative to each other by about 11 degrees upon binding arginine. All residues in MtbCArgR deemed to be important for hexamer formation and for arginine binding have been identified from the experimentally determined structures presented. The hexamer contains six regular sites in which the arginine molecules have one common binding mode and three sites in which the arginine molecules have two overlapping binding modes. The latter sites only bind the ligand at high (200 mM) arginine concentrations.

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