3BTN image
Deposition Date 2007-12-30
Release Date 2008-04-15
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3BTN
Title:
Crystal structure of antizyme inhibitor, an ornithine decarboxylase homologous protein
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Antizyme inhibitor 1
Gene (Uniprot):Azin1
Chain IDs:A, B
Chain Length:448
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
Crystallographic and biochemical studies revealing the structural basis for antizyme inhibitor function.
Protein Sci. 17 793 802 (2008)
PMID: 18369191 DOI: 10.1110/ps.073427208

Abstact

Antizyme inhibitor (AzI) regulates cellular polyamine homeostasis by binding to the polyamine-induced protein, Antizyme (Az), with greater affinity than ornithine decarboxylase (ODC). AzI is highly homologous to ODC but is not enzymatically active. In order to understand these specific characteristics of AzI and its differences from ODC, we determined the 3D structure of mouse AzI to 2.05 A resolution. Both AzI and ODC crystallize as a dimer. However, fewer interactions at the dimer interface, a smaller buried surface area, and lack of symmetry of the interactions between residues from the two monomers in the AzI structure suggest that this dimeric structure is nonphysiological. In addition, the absence of residues and interactions required for pyridoxal 5'-phosphate (PLP) binding suggests that AzI does not bind PLP. Biochemical studies confirmed the lack of PLP binding and revealed that AzI exists as a monomer in solution while ODC is dimeric. Our findings that AzI exists as a monomer and is unable to bind PLP provide two independent explanations for its lack of enzymatic activity and suggest the basis for its enhanced affinity toward Az.

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