3BKC image
Deposition Date 2007-12-06
Release Date 2008-04-15
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3BKC
Keywords:
Title:
Crystal structure of anti-amyloid beta FAB WO2 (P21, FormB)
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:WO2 IgG2a Fab fragment Heavy Chain
Chain IDs:B (auth: H)
Chain Length:228
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:WO2 IgG2a Fab fragment Light Chain Kappa
Chain IDs:A (auth: L)
Chain Length:252
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Amyloid-beta-anti-amyloid-beta complex structure reveals an extended conformation in the immunodominant B-cell epitope.
J.Mol.Biol. 377 181 192 (2008)
PMID: 18237744 DOI: 10.1016/j.jmb.2007.12.036

Abstact

Alzheimer's disease (AD) is the most common form of dementia. Amyloid-beta (A beta) peptide, generated by proteolytic cleavage of the amyloid precursor protein, is central to AD pathogenesis. Most pharmaceutical activity in AD research has focused on A beta, its generation and clearance from the brain. In particular, there is much interest in immunotherapy approaches with a number of anti-A beta antibodies in clinical trials. We have developed a monoclonal antibody, called WO2, which recognises the A beta peptide. To this end, we have determined the three-dimensional structure, to near atomic resolution, of both the antibody and the complex with its antigen, the A beta peptide. The structures reveal the molecular basis for WO2 recognition and binding of A beta. The A beta peptide adopts an extended, coil-like conformation across its major immunodominant B-cell epitope between residues 2 and 8. We have also studied the antibody-bound A beta peptide in the presence of metals known to affect its aggregation state and show that WO2 inhibits these interactions. Thus, antibodies that target the N-terminal region of A beta, such as WO2, hold promise for therapeutic development.

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Primary Citation of related structures