3BK3 image
Deposition Date 2007-12-05
Release Date 2008-05-27
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3BK3
Title:
Crystal structure of the complex of BMP-2 and the first Von Willebrand domain type C of Crossveinless-2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bone morphogenetic protein 2
Gene (Uniprot):BMP2
Mutations:F41M, Y91M
Chain IDs:A, B
Chain Length:114
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Crossveinless 2
Gene (Uniprot):bmper
Chain IDs:C, D
Chain Length:67
Number of Molecules:2
Biological Source:Danio rerio
Primary Citation
Crystal structure analysis reveals how the Chordin family member crossveinless 2 blocks BMP-2 receptor binding
Dev.Cell 14 739 750 (2008)
PMID: 18477456 DOI: 10.1016/j.devcel.2008.02.017

Abstact

Crossveinless 2 (CV-2) is an extracellular BMP modulator protein belonging to the Chordin family. During development it is expressed at sites of high BMP signaling and like Chordin CV-2 can either enhance or inhibit BMP activity. CV-2 binds to BMP-2 via its N-terminal Von Willebrand factor type C (VWC) domain 1. Here we report the structure of the complex between CV-2 VWC1 and BMP-2. The tripartite VWC1 binds BMP-2 only through a short N-terminal segment, called clip, and subdomain (SD) 1. Mutational analysis establishes that the clip segment and SD1 together create high-affinity BMP-2 binding. All four receptor-binding sites of BMP-2 are blocked in the complex, demonstrating that VWC1 acts as competitive inhibitor for all receptor types. In vivo experiments reveal that the BMP-enhancing (pro-BMP) activity of CV-2 is independent of BMP-2 binding by VWC1, showing that pro- and anti-BMP activities are structurally separated in CV-2.

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Primary Citation of related structures