3BIV image
Deposition Date 2007-12-01
Release Date 2007-12-25
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3BIV
Title:
Human thrombin-in complex with UB-THR11
Biological Source:
Source Organism:
Hirudo medicinalis (Taxon ID: 6421)
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Thrombin heavy chain
Gene (Uniprot):F2
Chain IDs:B (auth: H)
Chain Length:257
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Hirudin
Chain IDs:C (auth: I)
Chain Length:12
Number of Molecules:1
Biological Source:Hirudo medicinalis
Polymer Type:polypeptide(L)
Molecule:Thrombin light chain
Gene (Uniprot):F2
Chain IDs:A (auth: L)
Chain Length:29
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
TYS C TYR O-SULFO-L-TYROSINE
Peptide-like Molecules
PRD_000587
Primary Citation
Thermodynamic Inhibition Profile of a Cyclopentyl and a Cyclohexyl Derivative towards Thrombin: The Same but for Different Reasons
Angew.Chem.Int.Ed.Engl. 46 8511 8514 (2007)
PMID: 17902081 DOI: 10.1002/anie.200701169
Primary Citation of related structures