3BGQ image
Deposition Date 2007-11-27
Release Date 2007-12-11
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3BGQ
Keywords:
Title:
Human Pim-1 kinase in complex with an triazolo pyridazine inhibitor VX2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 65
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proto-oncogene serine/threonine-protein kinase Pim-1
Gene (Uniprot):PIM1
Chain IDs:A
Chain Length:333
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP A SER PHOSPHOSERINE
Ligand Molecules
Primary Citation
Docking study yields four novel inhibitors of the protooncogene pim-1 kinase.
J.Med.Chem. 51 1972 1975 (2008)
PMID: 18290603 DOI: 10.1021/jm701248t

Abstact

To supplement the hits from a high throughput screen, docking was performed against Pim-1 kinase. Glide docking was augmented with a filter to require traditional or aromatic CH..O hydrogen bonds to the kinase hinge. Four diverse actives, of 96 molecules assayed, had K(i) values between 0.091 and 4.5 microM. This gives a 14-fold enrichment over the earlier HTS run, and the two crystal structures solved confirmed the binding modes predicted by docking.

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Chemical

Disease

Primary Citation of related structures
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