3B9B image
Deposition Date 2007-11-04
Release Date 2007-12-18
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3B9B
Keywords:
Title:
Structure of the E2 beryllium fluoride complex of the SERCA Ca2+-ATPase
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.65 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
Gene (Uniprot):ATP2A1
Chain IDs:A
Chain Length:994
Number of Molecules:1
Biological Source:Oryctolagus cuniculus
Primary Citation
The structural basis of calcium transport by the calcium pump.
Nature 450 1036 1042 (2007)
PMID: 18075584 DOI: 10.1038/nature06418

Abstact

The sarcoplasmic reticulum Ca2+-ATPase, a P-type ATPase, has a critical role in muscle function and metabolism. Here we present functional studies and three new crystal structures of the rabbit skeletal muscle Ca2+-ATPase, representing the phosphoenzyme intermediates associated with Ca2+ binding, Ca2+ translocation and dephosphorylation, that are based on complexes with a functional ATP analogue, beryllium fluoride and aluminium fluoride, respectively. The structures complete the cycle of nucleotide binding and cation transport of Ca2+-ATPase. Phosphorylation of the enzyme triggers the onset of a conformational change that leads to the opening of a luminal exit pathway defined by the transmembrane segments M1 through M6, which represent the canonical membrane domain of P-type pumps. Ca2+ release is promoted by translocation of the M4 helix, exposing Glu 309, Glu 771 and Asn 796 to the lumen. The mechanism explains how P-type ATPases are able to form the steep electrochemical gradients required for key functions in eukaryotic cells.

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