3B8Q image
Entry Detail
PDB ID:
3B8Q
Keywords:
Title:
Crystal structure of the VEGFR2 kinase domain in complex with a naphthamide inhibitor
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2007-11-01
Release Date:
2008-04-01
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.27
R-Value Work:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Vascular endothelial growth factor receptor 2
Mutations:C817A, V916T, E990V
Chain IDs:A, B
Chain Length:314
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Naphthamides as Novel and Potent Vascular Endothelial Growth Factor Receptor Tyrosine Kinase Inhibitors: Design, Synthesis and Evaluation
J.Med.Chem. 51 1649 1667 (2008)
PMID: 18324761 DOI: 10.1021/jm701097z

Abstact

A series of naphthyl-based compounds were synthesized as potential inhibitors of vascular endothelial growth factor (VEGF) receptors. Investigations of structure-activity relationships led to the identification of a series of naphthamides that are potent inhibitors of the VEGF receptor tyrosine kinase family. Numerous analogues demonstrated low nanomolar inhibition of VEGF-dependent human umbilical vein endothelial cell (HUVEC) proliferation, and of these several compounds possessed favorable pharmacokinetic (PK) profiles. In particular, compound 48 demonstrated significant antitumor efficacy against established HT29 human colon adenocarcinoma xenografts implanted in athymic mice. A full account of the preparation, structure-activity relationships, pharmacokinetic properties, and pharmacology of analogues within this series is presented.

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