3B5N image
Deposition Date 2007-10-26
Release Date 2007-11-20
Last Version Date 2023-08-30
Entry Detail
PDB ID:
3B5N
Title:
Structure of the yeast plasma membrane SNARE complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.24
R-Value Work:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Synaptobrevin homolog 1
Gene (Uniprot):SNC1
Chain IDs:A, E, I
Chain Length:61
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein SSO1
Gene (Uniprot):SSO1
Chain IDs:B, F, J
Chain Length:69
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein SEC9
Gene (Uniprot):SEC9
Chain IDs:C, G, K
Chain Length:70
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein SEC9
Gene (Uniprot):SEC9
Chain IDs:D, H, L
Chain Length:64
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae
Primary Citation
The Structure of the Yeast Plasma Membrane SNARE Complex Reveals Destabilizing Water-filled Cavities.
J.Biol.Chem. 283 1113 1119 (2008)
PMID: 17956869 DOI: 10.1074/jbc.M707912200

Abstact

SNARE proteins form a complex that leads to membrane fusion between vesicles, organelles, and plasma membrane in all eukaryotic cells. We report the 1.7A resolution structure of the SNARE complex that mediates exocytosis at the plasma membrane in the yeast Saccharomyces cerevisiae. Similar to its neuronal and endosomal homologues, the S. cerevisiae SNARE complex forms a parallel four-helix bundle in the center of which is an ionic layer. The S. cerevisiae SNARE complex exhibits increased helix bending near the ionic layer, contains water-filled cavities in the complex core, and exhibits reduced thermal stability relative to mammalian SNARE complexes. Mutagenesis experiments suggest that the water-filled cavities contribute to the lower stability of the S. cerevisiae complex.

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Primary Citation of related structures