3B2U image
Deposition Date 2007-10-19
Release Date 2008-02-19
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3B2U
Title:
Crystal structure of isolated domain III of the extracellular region of the epidermal growth factor receptor in complex with the Fab fragment of IMC-11F8
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.58 Å
R-Value Free:
0.29
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Epidermal growth factor receptor
Gene (Uniprot):EGFR
Chain IDs:C (auth: A), F (auth: B), I (auth: E), L (auth: I), O (auth: M), R (auth: P), U (auth: S), X (auth: V)
Chain Length:214
Number of Molecules:8
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:IMC-11F8 Fab Heavy chain
Chain IDs:B (auth: H), E (auth: C), H (auth: F), K (auth: J), N, Q, T, W
Chain Length:223
Number of Molecules:8
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:IMC-11F8 Fab Light chain
Chain IDs:A (auth: L), D, G, J (auth: K), M (auth: O), P (auth: R), S (auth: U), V (auth: X)
Chain Length:213
Number of Molecules:8
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN C ASN GLYCOSYLATION SITE
Primary Citation
Structural basis for EGF receptor inhibition by the therapeutic antibody IMC-11F8.
Structure 16 216 227 (2008)
PMID: 18275813 DOI: 10.1016/j.str.2007.11.009

Abstact

Therapeutic anticancer strategies that target and inactivate the epidermal growth factor receptor (EGFR) are under intense study in the clinic. Here we describe the mechanism of EGFR inhibition by an antibody drug IMC-11F8. IMC-11F8 is a fully human antibody that has similar antitumor potency as the chimeric cetuximab/Erbitux and might represent a safer therapeutic alternative. We report the X-ray crystal structure of the Fab fragment of IMC-11F8 (Fab11F8) in complex with the entire extracellular region and with isolated domain III of EGFR. We compare this to our previous study of the cetuximab/EGFR interaction. Fab11F8 interacts with a remarkably similar epitope, but through a completely different set of interactions. Both the similarities and differences in binding of these two antibodies have important implications for the development of inhibitors that could exploit this same mechanism of EGFR inhibition.

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Primary Citation of related structures