3AY4 image
Deposition Date 2011-04-28
Release Date 2011-08-03
Last Version Date 2024-10-23
Entry Detail
PDB ID:
3AY4
Keywords:
Title:
Crystal structure of nonfucosylated Fc complexed with bis-glycosylated soluble form of Fc gamma receptor IIIa
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ig gamma-1 chain C region
Gene (Uniprot):IGHG1
Chain IDs:A, B
Chain Length:223
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Low affinity immunoglobulin gamma Fc region receptor III-A
Gene (Uniprot):FCGR3A
Mutations:N38Q,N74Q,N169Q
Chain IDs:C
Chain Length:179
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural basis for improved efficacy of therapeutic antibodies on defucosylation of their Fc glycans
Genes Cells 16 1071 1080 (2011)
PMID: 22023369 DOI: 10.1111/j.1365-2443.2011.01552.x

Abstact

Removal of the fucose residue from the N-glycans of the Fc portion of immunoglobulin G (IgG) results in a dramatic enhancement of antibody-dependent cellular cytotoxicity (ADCC) through improved affinity for Fcγ receptor IIIa (FcγRIIIa). Here, we present the 2.2-Å structure of the complex formed between nonfucosylated IgG1-Fc and a soluble form of FcγRIIIa (sFcγRIIIa) with two N-glycosylation sites. The crystal structure shows that one of the two N-glycans of sFcγRIIIa mediates the interaction with nonfucosylated Fc, thereby stabilizing the complex. However, fucosylation of the Fc N-glycans inhibits this interaction, because of steric hindrance, and furthermore, negatively affects the dynamics of the receptor binding site. Our results offer a structural basis for improvement in ADCC of therapeutic antibodies by defucosylation.

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