3AU9 image
Entry Detail
PDB ID:
3AU9
Title:
Crystal structure of the quaternary complex-1 of an isomerase
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2011-02-01
Release Date:
2011-08-10
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:1-deoxy-D-xylulose 5-phosphate reductoisomerase
Chain IDs:A, B
Chain Length:488
Number of Molecules:2
Biological Source:Plasmodium falciparum
Primary Citation
Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum
Sci Rep 1 9 9 (2011)
PMID: 22355528 DOI: 10.1038/srep00009

Abstact

The human malaria parasite Plasmodium falciparum is responsible for the deaths of more than a million people each year. Fosmidomycin has been proven to be efficient in the treatment of P. falciparum malaria by inhibiting 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR), an enzyme of the non-mevalonate pathway, which is absent in humans. However, the structural details of DXR inhibition by fosmidomycin in P. falciparum are unknown. Here, we report the crystal structures of fosmidomycin-bound complete quaternary complexes of PfDXR. Our study revealed that (i) an intrinsic flexibility of the PfDXR molecule accounts for an induced-fit movement to accommodate the bound inhibitor in the active site and (ii) a cis arrangement of the oxygen atoms of the hydroxamate group of the bound inhibitor is essential for tight binding of the inhibitor to the active site metal. We expect the present structures to be useful guides for the design of more effective antimalarial compounds.

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