ISDA

Deposition Date 2010-08-30

Release Date 2011-07-27

Last Version Date 2023-11-01

Entry Detail

PDB ID:

3AN4

Keywords:

TRANSCRIPTION

Title:

Human PPAR gamma ligand binding domain in complex with a gamma selective agonist MO4R

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.30 Å

R-Value Free:

0.28

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

C 1 2 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peroxisome proliferator-activated receptor gamma
Gene (Uniprot):PPARG
Chain IDs:A, B
Chain Length:286
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P37231 Pfam ID:PF00104

Ligand Molecules

M7R

Primary Citation

Design, Synthesis, and Structural Analysis of Phenylpropanoic Acid-Type PPAR gamma-Selective Agonists: Discovery of Reversed Stereochemistry-Activity Relationship

Ohashi, M, Oyama, T, Nakagome, I, Satoh, M, Nishio, Y, Nobusada, H, Hirono, S, Morikawa, K, Hashimoto, Y, Miyachi, H.Show

J.Med.Chem. 54 331 341 (2011)

PMID: 21128600 DOI: 10.1021/jm101233f

Abstact

Peroxisome proliferator-activated receptor gamma (PPARγ) is a ligand-mediated transcription factor with roles in glucose, lipid, and lipoprotein homeostasis, and PPARγ ligands are expected have therapeutic potential in these as well as other areas. We report here the design, synthesis, crystallographic analysis, and computational studies of α-benzylphenylpropanoic acid PPARγ agonists. Interestingly, these compounds show a reversal of the stereochemistry-transactivation activity relationship observed with other phenylpropanoic acid ligands.

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