3AAV image
Deposition Date 2009-11-26
Release Date 2010-04-07
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3AAV
Keywords:
Title:
Bovine beta-trypsin bound to meta-diamidino schiff base copper (II) chelate
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.20
R-Value Work:
0.18
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cationic trypsin
Gene (Uniprot):PRSS1
Chain IDs:A, B
Chain Length:223
Number of Molecules:2
Biological Source:Bos taurus
Primary Citation
Structural basis for the design of novel Schiff base metal chelate inhibitors of trypsin
Bioorg.Med.Chem. 18 2076 2080 (2010)
PMID: 20202854 DOI: 10.1016/j.bmc.2010.02.016

Abstact

The crystal structures of the complexes of bovine trypsin with m-guanidinosalicylidene-l-alaninato(aqua)copper(II) hydrochloride (inhibitor 1), [N,N'-bis(m-guanidinosalicylidene)ethylenediaminato]copper(II) (inhibitor 2), and [N,N'-bis(m-amidinosalicylidene)ethylenediaminato]copper(II) (inhibitor 4) have been determined. The guanidine-containing trypsin-inhibitors (1 and 2) bind to the trypsin active site in a manner similar to that previously reported for amidine-containing inhibitors, for example, m-amidinosalicylidene-l-alaninato(aqua)copper(II) hydrochloride (inhibitor 3). However, the binding mode of the guanidino groups of inhibitors 1 and 2 to Asp189 in the S1 pocket of trypsin was found to be markedly different from that of the amidino group of inhibitor 3. The present X-ray analyses revealed that the interactions of the metal ion of the inhibitors with the active site residues of trypsin play a crucial role in the binding affinity to the trypsin molecule. These structural information and inhibitory activity data for amidine- and guanidine-containing Schiff base metal chelate inhibitors provide new avenues for designing novel inhibitors against physiologically important trypsin-like serine proteases.

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Primary Citation of related structures