3A5P image
Entry Detail
PDB ID:
3A5P
Title:
Crystal structure of hemagglutinin
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-08-10
Release Date:
2010-08-11
Method Details:
Experimental Method:
Resolution:
1.82 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Haemagglutinin I
Chain IDs:A, B, C, D
Chain Length:104
Number of Molecules:4
Biological Source:Physarum polycephalum
Primary Citation
The Structure of Physarum polycephalum hemagglutinin I suggests a minimal carbohydrate recognition domain of legume lectin fold
J.Mol.Biol. 405 560 569 (2011)
PMID: 21094650 DOI: 10.1016/j.jmb.2010.11.024

Abstact

Physarum polycephalum hemagglutinin I (HA1) is a 104-residue protein that is secreted to extracellular space. The crystal structure of HA1 has a β-sandwich fold found among lectin structures, such as legume lectins and galectins. Interestingly, the β-sandwich of HA1 lacks a jelly roll motif and is essentially composed of two simple up-and-down β-sheets. This up-and-down β-sheet motif is well conserved in other legume lectin-like proteins derived from animals, plants, bacteria, and viruses. It is more noteworthy that the up-and-down β-sheet motif includes many residues that make contact with the target carbohydrates. Our NMR data demonstrate that HA1 lacking a jelly roll motif also binds to its target glycopeptide. Taken together, these data show that the up-and-down β-sheet motif provides a fundamental scaffold for the binding of legume lectin-like proteins to the target carbohydrates, and the structure of HA1 suggests a minimal carbohydrate recognition domain.

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