2q1E image
Deposition Date 2007-05-24
Release Date 2008-04-08
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2Q1E
Keywords:
Title:
Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 41 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Amyloidogenic immunoglobulin light chain protein AL-09
Mutagens:S30N, N34I, K42Q, N53T, D70E, I83L, Y87H
Chain IDs:A, B, C, D
Chain Length:109
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem. 283 15853 15860 (2008)
PMID: 18400753 DOI: 10.1074/jbc.M705347200

Abstact

Amyloidoses are devastating and currently incurable diseases in which the process of amyloid formation causes fatal cellular and organ damage. The molecular mechanisms underlying amyloidoses are not well known. In this study, we address the structural basis of immunoglobulin light chain amyloidosis, which results from deposition of light chains produced by clonal plasma cells. We compare light chain amyloidosis protein AL-09 to its wild-type counterpart, the kappaI O18/O8 light chain germline. Crystallographic studies indicate that both proteins form dimers. However, AL-09 has an altered dimer interface that is rotated 90 degrees from the kappaI O18/O8 dimer interface. The three non-conservative mutations in AL-09 are located within the dimer interface, consistent with their role in the decreased stability of this amyloidogenic protein. Moreover, AL-09 forms amyloid fibrils more quickly than kappaI O18/O8 in vitro. These results support the notion that the increased stability of the monomer and delayed fibril formation, together with a properly formed dimer, may be protective against amyloidogenesis. This could open a new direction into rational drug design for amyloidogenic proteins.

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Protein

Chemical

Disease

Primary Citation of related structures