ISDA

Deposition Date 2005-06-17

Release Date 2006-04-18

Last Version Date 2024-11-13

Entry Detail

PDB ID:

2CW8

Keywords:

HYDROLASE

Title:

Crystal structure of intein homing endonuclease II

Biological Source:

Source Organism:

Thermococcus kodakarensis (Taxon ID: 69014)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.25

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

C 2 2 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Endonuclease PI-PkoII
Gene (Uniprot):pol
Chain IDs:A
Chain Length:537
Number of Molecules:1
Biological Source:Thermococcus kodakarensis

UniProt ID:P77933 Pfam ID:PF14890, PF18714, PF14528 EC:2.7.7.7

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
MSE	A	MET	SELENOMETHIONINE

Ligand Molecules

GOL

SO4

Primary Citation

Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1

Matsumura, H, Takahashi, H, Inoue, T, Yamamoto, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.Show

Proteins 63 711 715 (2006)

PMID: 16493661 DOI: 10.1002/prot.20858

Primary Citation of related structures