2ZSI image
Deposition Date 2008-09-10
Release Date 2008-11-25
Last Version Date 2023-11-01
Entry Detail
PDB ID:
2ZSI
Title:
Structural basis of gibberellin(GA4)-induced DELLA recognition by the gibberellin receptor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.22
R-Value Work:
0.19
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable gibberellin receptor GID1L1
Gene (Uniprot):GID1A
Chain IDs:A
Chain Length:351
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DELLA protein GAI
Gene (Uniprot):GAI
Chain IDs:B
Chain Length:110
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Gibberellin-induced DELLA recognition by the gibberellin receptor GID1
Nature 456 459 463 (2008)
PMID: 19037309 DOI: 10.1038/nature07519

Abstact

Gibberellins control a range of growth and developmental processes in higher plants and have been widely used in the agricultural industry. By binding to a nuclear receptor, GIBBERELLIN INSENSITIVE DWARF1 (GID1), gibberellins regulate gene expression by promoting degradation of the transcriptional regulator DELLA proteins, including GIBBERELLIN INSENSITIVE (GAI). The precise manner in which GID1 discriminates and becomes activated by bioactive gibberellins for specific binding to DELLA proteins remains unclear. Here we present the crystal structure of a ternary complex of Arabidopsis thaliana GID1A, a bioactive gibberellin and the amino-terminal DELLA domain of GAI. In this complex, GID1A occludes gibberellin in a deep binding pocket covered by its N-terminal helical switch region, which in turn interacts with the DELLA domain containing DELLA, VHYNP and LExLE motifs. Our results establish a structural model of a plant hormone receptor that is distinct from the mechanism of the hormone perception and effector recognition of the known auxin receptors.

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