ISDA

Deposition Date 2008-02-22

Release Date 2009-02-24

Last Version Date 2023-11-01

Entry Detail

PDB ID:

2ZIR

Keywords:

TRANSFERASE

Title:

Crystal Structure of rat protein farnesyltransferase complexed with a benzofuran inhibitor and FPP

Biological Source:

Source Organism:

Rattus norvegicus (Taxon ID: 10116)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.40 Å

R-Value Free:

0.23

R-Value Work:

0.19

Space Group:

P 61

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein farnesyltransferase subunit alpha
Gene (Uniprot):Fnta
Mutations:I156T
Chain IDs:A
Chain Length:377
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q04631 Pfam ID:PF01239 EC:2.5.1.58

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein farnesyltransferase subunit beta
Gene (Uniprot):Fntb
Chain IDs:B
Chain Length:440
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q02293 Pfam ID:PF00432 EC:2.5.1.58

Ligand Molecules

FPP

GOL

NH7

Primary Citation

Synthesis and structure-activity relationships of novel benzofuran farnesyltransferase inhibitors

Asoh, K, Kohchi, M, Hyoudoh, I, Ohtsuka, T, Masubuchi, M, Kawasaki, K, Ebiike, H, Shiratori, Y, Fukami, T.A, Kondoh, O, Tsukaguchi, T, Ishii, N, Aoki, Y, Shimma, N, Sakaitani, M.Show

Bioorg.Med.Chem.Lett. 19 1753 1757 (2009)

PMID: 19217288 DOI: 10.1016/j.bmcl.2009.01.074

Abstact

A series of benzofuran-based farnesyltransferase inhibitors have been designed and synthesized as antitumor agents. Among them, 11f showed the most potent enzyme inhibitory activity (IC(50)=1.1nM) and antitumor activity in human cancer xenografts in mice.

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Primary Citation of related structures