ISDA

Deposition Date 2007-11-22

Release Date 2008-05-27

Last Version Date 2023-11-01

Entry Detail

PDB ID:

2ZDH

Keywords:

LIGASE

Title:

Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8

Biological Source:

Source Organism:

Thermus thermophilus (Taxon ID: )

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.23

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:D-alanine--D-alanine ligase
Gene (Uniprot):ddl
Chain IDs:A, B, C, D
Chain Length:319
Number of Molecules:4
Biological Source:Thermus thermophilus

UniProt ID:Q5SHZ3 Pfam ID:PF01820, PF07478 EC:6.3.2.4

Ligand Molecules

ADP

DAL

Primary Citation

Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8

Kitamura, Y, Yokoyama, S, Kuramitsu, S.Show

To be Published ? ? ? (?)

Primary Citation of related structures