2ZDG image
Deposition Date 2007-11-22
Release Date 2008-05-27
Last Version Date 2023-11-01
Entry Detail
PDB ID:
2ZDG
Keywords:
LIGASE
Title:
Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
Biological Source:
Source Organism:
Thermus thermophilus (Taxon ID: )
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
2ZDG validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-alanine--D-alanine ligase
Gene (Uniprot):ddl
Chain IDs:A, B, C, D
Chain Length:319
Number of Molecules:4
Biological Source:Thermus thermophilus
UniProt ID:Q5SHZ3 Pfam ID:PF01820, PF07478 EC:6.3.2.4
Ligand Molecules
ADP
MG
Primary Citation
Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
To be Published ? ? ? (?)
Primary Citation of related structures
2YZG
2YZM