2ZCF image
Entry Detail
PDB ID:
2ZCF
Keywords:
Title:
Mutational study on Alpha-Gln90 of Fe-type nitrile hydratase from Rhodococcus sp. N771
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2007-11-08
Release Date:
2007-11-20
Method Details:
Experimental Method:
Resolution:
1.43 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nitrile hydratase subunit alpha
Mutations:Q90N
Chain IDs:A
Chain Length:206
Number of Molecules:1
Biological Source:Rhodococcus erythropolis
Polymer Type:polypeptide(L)
Description:Nitrile hydratase subunit beta
Chain IDs:B
Chain Length:212
Number of Molecules:1
Biological Source:Rhodococcus erythropolis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD A CYS 3-SULFINOALANINE
CSO A CYS S-HYDROXYCYSTEINE
Primary Citation
Mutational study on alphaGln90 of Fe-type nitrile hydratase from Rhodococcus sp. N771
Biosci.Biotechnol.Biochem. 70 881 889 (2006)
PMID: 16636455 DOI: 10.1271/bbb.70.881

Abstact

Nitrile hydratase (NHase) from Rhodococcus sp. N771 is a non-heme iron enzyme having post-translationally modified cysteine ligands, alphaCys112-SO2H and alphaCys114-SOH. We replaced alphaGln90, which is conserved in all known NHases and involved in the hydrogen-bond network around the catalytic center, with glutamic acid or asparagine. The kcat of alphaQ90E and alphaQ90N mutants decreased to 24% and 5% that of wild type respectively, but the effect of mutations on Km was not very significant. In both mutants, the alphaCys114-SOH modification appeared to be responsible for the catalysis as in native NHase. We crystallized the nitrosylated alphaQ90N mutant and determined its structure at a resolution of 1.43 A. The structure was basically identical to that of native nitrosylated NHase except for the mutated site and its vicinity. The structural difference between native and alphaQ90N mutant NHases suggested the importance of the hydrogen bond networks between alphaGln90 and the iron center for the catalytic activity.

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