2ZB2 image
Deposition Date 2007-10-15
Release Date 2008-09-02
Last Version Date 2023-11-01
Entry Detail
PDB ID:
2ZB2
Keywords:
Title:
Human liver glycogen phosphorylase a complexed with glcose and 5-chloro-N-[4-(1,2-dihydroxyethyl)phenyl]-1H-indole-2-carboxamide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.45 Å
R-Value Free:
0.30
R-Value Work:
0.26
R-Value Observed:
0.30
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycogen phosphorylase, liver form
Gene (Uniprot):PYGL
Chain IDs:A, B
Chain Length:849
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Synthesis of 5-chloro-N-aryl-1H-indole-2-carboxamide derivatives as inhibitors of human liver glycogen phosphorylase a.
Bioorg.Med.Chem. 16 5452 5464 (2008)
PMID: 18434170 DOI: 10.1016/j.bmc.2008.04.010

Abstact

A series of 5-chloro-N-aryl-1H-indole-2-carboxamide derivatives were prepared and evaluated as inhibitors of human liver glycogen phosphorylase a (hLGPa). One compound, 5-chloro-N-[4-(1,2-dihydroxyethyl)phenyl]-1H-indole-2-carboxamide (2f), inhibited hLGPa with an IC(50) of 0.90microM. The pyridine analogue of 2f showed inhibitory activity of glucagon-induced glucose output in cultured primary hepatocytes with an IC(50) of 0.62microM and oral hypoglycemic activity in diabetic db/db mice. Crystallographic determination of the complex of 2f with hLGPa showed binding of the inhibitor in a solvent cavity at the dimer interface, with the two hydroxyl groups making favorable electrostatic interactions with hLGPa.

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Primary Citation of related structures