ISDA: 2Z8O

Deposition Date 2007-09-07

Release Date 2007-12-18

Last Version Date 2024-11-20

Entry Detail

PDB ID:

2Z8O

Keywords:

LYASE

Title:

Structural basis for the catalytic mechanism of phosphothreonine lyase

Biological Source:

Source Organism:

Salmonella typhimurium (Taxon ID: 602)

Host Organism:

Escherichia coli BL21

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.40 Å

R-Value Free:

0.25

R-Value Work:

0.24

R-Value Observed:

0.24

Space Group:

P 41 2 2

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:27.5 kDa virulence protein
Gene (Uniprot):spvC
Chain IDs:A, B
Chain Length:241
Number of Molecules:2
Biological Source:Salmonella typhimurium

UniProt ID:P0A2M9 Pfam ID:PF03536

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
MSE	A	MET	SELENOMETHIONINE

Ligand Molecules

TLA

Primary Citation

Structural basis for the catalytic mechanism of phosphothreonine lyase.

Chen, L, Wang, H, Zhang, J, Gu, L, Huang, N, Zhou, J.M, Chai, J.Show

Nat.Struct.Mol.Biol. 15 101 102 (2008)

PMID: 18084305 DOI: 10.1038/nsmb1329

Abstact

Salmonella SpvC belongs to a new enzyme family designated phosphothreonine lyases that irreversibly inactivate mitogen-activated protein kinases. The crystal structure of SpvC reported here reveals that the two phosphorylated residues in the substrate peptide predominantly mediate its recognition by SpvC. Substrate-induced conformational changes in SpvC sequester the phosphothreonine in a completely solvent-free environment, preventing the hydrolysis of the phosphate group and facilitating the elimination reaction.

Legend

Protein

Chemical

Disease

Primary Citation of related structures