2Z87 image
Deposition Date 2007-09-03
Release Date 2008-09-16
Last Version Date 2024-03-13
Entry Detail
PDB ID:
2Z87
Keywords:
Title:
Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.28
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chondroitin synthase
Gene (Uniprot):kfoC
Chain IDs:A, B
Chain Length:624
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
Crystal structure of chondroitin polymerase from Escherichia coli K4.
Biochem. Biophys. Res. Commun. 378 10 14 (2009)
PMID: 18771653 DOI: 10.1016/j.bbrc.2008.08.121

Abstact

Elongation of glycosaminoglycan chains, such as heparan and chondroitin, is catalyzed by bi-functional glycosyltransferases, for which both 3-dimensional structures and reaction mechanisms remain unknown. The bacterial chondroitin polymerase K4CP catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. Here, we have determined the crystal structure of K4CP in the presence of UDP and UDP-GalNAc as well as with UDP and UDP-GlcUA. The structures consisted of two GT-A fold domains in which the two active sites were 60A apart. UDP-GalNAc and UDP-GlcUA were found at the active sites of the N-terminal and C-terminal domains, respectively. The present K4CP structures have provided the structural basis for further investigating the molecular mechanism of biosynthesis of chondroitin chain.

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