2YZM image
Deposition Date 2007-05-06
Release Date 2007-11-06
Last Version Date 2023-10-25
Entry Detail
PDB ID:
2YZM
Keywords:
LIGASE
Title:
Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
Biological Source:
Source Organism:
Thermus thermophilus (Taxon ID: 300852)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.21 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
2YZM validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-alanine--D-alanine ligase
Gene (Uniprot):ddl
Chain IDs:A, B, C
Chain Length:319
Number of Molecules:3
Biological Source:Thermus thermophilus
UniProt ID:Q5SHZ3 Pfam ID:PF01820, PF07478 EC:6.3.2.4
Ligand Molecules
DAL
Primary Citation
Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
To be Published ? ? ? (?)
Primary Citation of related structures
2YZG