2YOQ image
Deposition Date 2012-10-26
Release Date 2013-01-30
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2YOQ
Keywords:
Title:
Structure of FAM3B PANDER E30 construct
Biological Source:
Source Organism:
MUS MUSCULUS (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN FAM3B
Gene (Uniprot):Fam3b
Chain IDs:A, B, C
Chain Length:214
Number of Molecules:3
Biological Source:MUS MUSCULUS
Ligand Molecules
Primary Citation
Fam3B Pander and Fam3C Ilei Represent a Distinct Class of Signaling Molecules with a Non-Cytokine-Like Fold.
Structure 21 306 ? (2013)
PMID: 23333428 DOI: 10.1016/J.STR.2012.12.009

Abstact

The FAM3 superfamily is predicted to contain classical four-helix bundle cytokines, featuring a typical up-up-down-down fold. Two members of FAM3 have been extensively studied. FAM3B PANDER has been shown to regulate glucose homeostasis and β cell function, whereas the homologous FAM3C ILEI has been shown to be involved in epithelial-mesenchymal transition and cancer. Here, we present a three-dimensional structure of a FAM3 protein, murine PANDER. Contrary to previous suggestions, PANDER exhibits a globular β-β-α fold. The structure is composed of two antiparallel β sheets lined by three short helices packing to form a highly conserved water-filled cavity. The fold shares no relation to the predicted four-helix cytokines but is conserved throughout the FAM3 superfamily. The available biological data and the unexpected new fold indicate that FAM3 PANDER and ILEI could represent a new structural class of signaling molecules, with a different mode of action compared to the traditional four-helix bundle cytokines.

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Primary Citation of related structures