2YMW image
Deposition Date 2012-10-10
Release Date 2013-10-23
Last Version Date 2025-04-09
Entry Detail
PDB ID:
2YMW
Keywords:
OXIDOREDUCTASE
Title:
Structure of the epsilon-lysine oxidase from Marinomonas mediterranea
Biological Source:
Source Organism:
MARINOMONAS MEDITERRANEA (Taxon ID: 717774)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.41 Å
R-Value Free:
0.27
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 2 1
2YMW validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:L-LYSINE 6-OXIDASE
Gene (Uniprot):lodA
Chain IDs:A, B
Chain Length:746
Number of Molecules:2
Biological Source:MARINOMONAS MEDITERRANEA
UniProt ID:F2JXJ3 Pfam ID:PF17990, PF18417 EC:1.4.3.20
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TRQ A TRP ?
Ligand Molecules
EOH
GOL
NA
Primary Citation
Structure of the Epsilon-Lysine Oxidase from Marinomonas Mediterranea
To be Published ? ? ? (?)
Primary Citation of related structures
2YMW