2YGY image
Entry Detail
PDB ID:
2YGY
Keywords:
Title:
Structure of wild type E. coli N-acetylneuraminic acid lyase in space group P21 crystal form II
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2011-04-23
Release Date:
2012-04-04
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:N-ACETYLNEURAMINATE LYASE
Chain IDs:A, B, C, D
Chain Length:304
Number of Molecules:4
Biological Source:ESCHERICHIA COLI
Primary Citation
Pathological macromolecular crystallographic data affected by twinning, partial-disorder and exhibiting multiple lattices for testing of data processing and refinement tools.
Sci Rep 8 14876 14876 (2018)
PMID: 30291262 DOI: 10.1038/s41598-018-32962-6

Abstact

Twinning is a crystal growth anomaly, which has posed a challenge in macromolecular crystallography (MX) since the earliest days. Many approaches have been used to treat twinned data in order to extract structural information. However, in most cases it is usually simpler to rescreen for new crystallization conditions that yield an untwinned crystal form or, if possible, collect data from non-twinned parts of the crystal. Here, we report 11 structures of engineered variants of the E. coli enzyme N-acetyl-neuraminic lyase which, despite twinning and incommensurate modulation, have been successfully indexed, solved and deposited. These structures span a resolution range of 1.45-2.30 Å, which is unusually high for datasets presenting such lattice disorders in MX and therefore these data provide an excellent test set for improving and challenging MX data processing programs.

Legend

Protein

Chemical

Disease

Primary Citation of related structures