2YEW image
Deposition Date 2011-03-31
Release Date 2012-04-18
Last Version Date 2024-10-23
Entry Detail
PDB ID:
2YEW
Keywords:
Title:
Modeling Barmah Forest virus structural proteins
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
5.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CAPSID PROTEIN
Chain IDs:A, D, G, J
Chain Length:253
Number of Molecules:4
Biological Source:BARMAH FOREST VIRUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:E1 ENVELOPE GLYCOPROTEIN
Chain IDs:B, E, H, K
Chain Length:427
Number of Molecules:4
Biological Source:BARMAH FOREST VIRUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:E2 ENVELOPE GLYCOPROTEIN
Chain IDs:C, F, I, L
Chain Length:421
Number of Molecules:4
Biological Source:BARMAH FOREST VIRUS
Ligand Molecules
Primary Citation
The Structure of Barmah Forest Virus as Revealed by Cryo-Electron Microscopy at a 6-Angstrom Resolution Has Detailed Transmembrane Protein Architecture and Interactions.
J.Virol. 85 9327 ? (2011)
PMID: 21752915 DOI: 10.1128/JVI.05015-11

Abstact

Barmah Forest virus (BFV) is a mosquito-borne alphavirus that infects humans. A 6-Å-resolution cryo-electron microscopy three-dimensional structure of BFV exhibits a typical alphavirus organization, with RNA-containing nucleocapsid surrounded by a bilipid membrane anchored with the surface proteins E1 and E2. The map allows details of the transmembrane regions of E1 and E2 to be seen. The C-terminal end of the E2 transmembrane helix binds to the capsid protein. Following the E2 transmembrane helix, a short α-helical endodomain lies on the inner surface of the lipid envelope. The E2 endodomain interacts with E1 transmembrane helix from a neighboring E1-E2 trimeric spike, thereby acting as a spacer and a linker between spikes. In agreement with previous mutagenesis studies, the endodomain plays an important role in recruiting other E1-E2 spikes to the budding site during virus assembly. The E2 endodomain may thus serve as a target for antiviral drug design.

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Protein

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Disease

Primary Citation of related structures