2YBU image
Deposition Date 2011-03-10
Release Date 2011-06-08
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2YBU
Keywords:
Title:
Crystal structure of human acidic chitinase in complex with bisdionin F
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ACIDIC MAMMALIAN CHITINASE
Gene (Uniprot):CHIA
Chain IDs:A, B, C, D, E, F
Chain Length:381
Number of Molecules:6
Biological Source:HOMO SAPIENS
Primary Citation
Analyzing airway inflammation with chemical biology: dissection of acidic mammalian chitinase function with a selective drug-like inhibitor.
Chem. Biol. 18 569 579 (2011)
PMID: 21609838 DOI: 10.1016/j.chembiol.2011.02.017

Abstact

Acidic mammalian chitinase (AMCase) is produced in the lung during allergic inflammation and asthma, and inhibition of enzymatic activity has been considered as a therapeutic strategy. However, most chitinase inhibitors are nonselective, additionally inhibiting chitotriosidase activity. Here, we describe bisdionin F, a competitive AMCase inhibitor with 20-fold selectivity for AMCase over chitotriosidase, designed by utilizing the AMCase crystal structure and dicaffeine scaffold. In a murine model of allergic inflammation, bisdionin F-treatment attenuated chitinase activity and alleviated the primary features of allergic inflammation including eosinophilia. However, selective AMCase inhibition by bisdionin F also caused dramatic and unexpected neutrophilia in the lungs. This class of inhibitor will be a powerful tool to dissect the functions of mammalian chitinases in disease and represents a synthetically accessible scaffold to optimize inhibitory properties in terms of airway inflammation.

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Primary Citation of related structures