2YA1 image
Deposition Date 2011-02-17
Release Date 2011-04-20
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2YA1
Keywords:
Title:
Product complex of a multi-modular glycogen-degrading pneumococcal virulence factor SpuA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PUTATIVE ALKALINE AMYLOPULLULANASE
Chain IDs:A
Chain Length:1014
Number of Molecules:1
Biological Source:STREPTOCOCCUS PNEUMONIAE
Peptide-like Molecules
PRD_900009
PRD_900010
Primary Citation
The Conformation and Function of a Multimodular Glycogen-Degrading Pneumococcal Virulence Factor.
Structure 19 640 ? (2011)
PMID: 21565699 DOI: 10.1016/J.STR.2011.03.001

Abstact

SpuA is a large multimodular cell wall-attached enzyme involved in the degradation of glycogen by the pathogenic bacterium Streptococcus pneumoniae. The deletion of the gene encoding SpuA from the bacterium resulted in a strain with reduced competitiveness in a mouse model of virulence relative to the parent strain, linking the degradation of host-glycogen to the virulence of the bacterium. Through the combined use of X-ray crystallography, small-angle X-ray scattering, and inhibitor binding, the molecular features involved in substrate recognition by this complex protein are revealed. This uniquely illustrates the complexity of the active site, the conformational changes incurred during carbohydrate binding by this protein, and the interaction and cooperation of its composite modules during this process. New insight into the function of this particular pneumococcal virulence factor is provided along with substantial contributions to the nascent framework for understanding the structural and functional interplay between modules in multimodular carbohydrate-active enzymes.

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Primary Citation of related structures