2XUR image
Deposition Date 2010-10-20
Release Date 2011-02-16
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2XUR
Keywords:
Title:
The G157C mutation in the Escherichia coli sliding clamp specifically affects initiation of replication
Biological Source:
Source Organism:
ESCHERICHIA COLI (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA POLYMERASE III SUBUNIT BETA
Gene (Uniprot):dnaN
Mutations:YES
Chain IDs:A, B
Chain Length:373
Number of Molecules:2
Biological Source:ESCHERICHIA COLI
Primary Citation
The G157C Mutation in the Escherichia Coli Sliding Clamp Specifically Affects Initiation of Replication.
Mol.Microbiol. 79 433 ? (2011)
PMID: 21219462 DOI: 10.1111/J.1365-2958.2010.07453.X

Abstact

Escherichia coli cells with a point mutation in the dnaN gene causing the amino acid change Gly157 to Cys, were found to underinitiate replication and grow with a reduced origin and DNA concentration. The mutant β clamp also caused excessive conversion of ATP-DnaA to ADP-DnaA. The DnaA protein was, however, not the element limiting initiation of replication. Overproduction of DnaA protein, which in wild-type cells leads to over-replication, had no effect in the dnaN(G157C) mutant. Origins already opened by DnaA seemed to remain open for a prolonged period, with a stage of initiation involving β clamp loading, presumably limiting the initiation process. The existence of opened origins led to a moderate SOS response. Lagging strand synthesis, which also requires loading of the β clamp, was apparently unaffected. The result indicates that some aspects of β clamp activity are specific to the origin. It is possible that the origin specific activities of β contribute to regulation of initiation frequency.

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