2XRP image
Deposition Date 2010-09-18
Release Date 2010-11-24
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2XRP
Title:
Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
BOS TAURUS (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
8.20 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TUBULIN BETA-2B CHAIN
Gene (Uniprot):TUBB2B
Chain IDs:A, C, E, G
Chain Length:445
Number of Molecules:4
Biological Source:BOS TAURUS
Polymer Type:polypeptide(L)
Molecule:TUBULIN ALPHA-1D CHAIN
Gene (Uniprot):TUBA1D
Chain IDs:B, D, F, H
Chain Length:452
Number of Molecules:4
Biological Source:BOS TAURUS
Polymer Type:polypeptide(L)
Molecule:NEURONAL MIGRATION PROTEIN DOUBLECORTIN
Gene (Uniprot):DCX
Chain IDs:I
Chain Length:95
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
Template-Free 13-Protofilament Microtubule-Map Assembly Visualized at 8 A Resolution.
J.Cell Biol. 191 463 ? (2010)
PMID: 20974813 DOI: 10.1083/JCB.201007081

Abstact

Microtubule-associated proteins (MAPs) are essential for regulating and organizing cellular microtubules (MTs). However, our mechanistic understanding of MAP function is limited by a lack of detailed structural information. Using cryo-electron microscopy and single particle algorithms, we solved the 8 Å structure of doublecortin (DCX)-stabilized MTs. Because of DCX's unusual ability to specifically nucleate and stabilize 13-protofilament MTs, our reconstruction provides unprecedented insight into the structure of MTs with an in vivo architecture, and in the absence of a stabilizing drug. DCX specifically recognizes the corner of four tubulin dimers, a binding mode ideally suited to stabilizing both lateral and longitudinal lattice contacts. A striking consequence of this is that DCX does not bind the MT seam. DCX binding on the MT surface indirectly stabilizes conserved tubulin-tubulin lateral contacts in the MT lumen, operating independently of the nucleotide bound to tubulin. DCX's exquisite binding selectivity uncovers important insights into regulation of cellular MTs.

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Primary Citation of related structures