2XQL image
Deposition Date 2010-09-02
Release Date 2010-11-03
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2XQL
Keywords:
Title:
Fitting of the H2A-H2B histones in the electron microscopy map of the complex Nucleoplasmin:H2A-H2B histones (1:5).
Biological Source:
Source Organism:
GALLUS GALLUS (Taxon ID: 9031)
Method Details:
Experimental Method:
Resolution:
19.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HISTONE H2A-IV
Chain IDs:A, C, E, G, I
Chain Length:91
Number of Molecules:5
Biological Source:GALLUS GALLUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HISTONE H2B 5
Gene (Uniprot):H2B-V
Chain IDs:B, D, F, H, J
Chain Length:90
Number of Molecules:5
Biological Source:GALLUS GALLUS
Ligand Molecules
Primary Citation
Nucleoplasmin Binds Histone H2A-H2B Dimers Through its Distal Face.
J.Biol.Chem. 285 33771 ? (2010)
PMID: 20696766 DOI: 10.1074/JBC.M110.150664

Abstact

Nucleoplasmin (NP) is a pentameric chaperone that regulates the condensation state of chromatin extracting specific basic proteins from sperm chromatin and depositing H2A-H2B histone dimers. It has been proposed that histones could bind to either the lateral or distal face of the pentameric structure. Here, we combine different biochemical and biophysical techniques to show that natural, hyperphosphorylated NP can bind five H2A-H2B dimers and that the amount of bound ligand depends on the overall charge (phosphorylation level) of the chaperone. Three-dimensional reconstruction of NP/H2A-H2B complex carried out by electron microscopy reveals that histones interact with the chaperone distal face. Limited proteolysis and mass spectrometry indicate that the interaction results in protection of the histone fold and most of the H2A and H2B C-terminal tails. This structural information can help to understand the function of NP as a histone chaperone.

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Primary Citation of related structures