2XPK image
Deposition Date 2010-08-26
Release Date 2011-03-16
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2XPK
Keywords:
Title:
Cell-penetrant, nanomolar O-GlcNAcase inhibitors selective against lysosomal hexosaminidases
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:O-GLCNACASE NAGJ
Gene (Uniprot):nagJ
Mutagens:YES
Chain IDs:A, B
Chain Length:594
Number of Molecules:2
Biological Source:CLOSTRIDIUM PERFRINGENS
Ligand Molecules
Primary Citation
Cell-Penetrant, Nanomolar O-Glcnacase Inhibitors Selective Against Lysosomal Hexosaminidases.
Chem.Biol 17 1250 ? (2010)
PMID: 21095575 DOI: 10.1016/J.CHEMBIOL.2010.09.014

Abstact

Posttranslational modification of metazoan nucleocytoplasmic proteins with N-acetylglucosamine (O-GlcNAc) is essential, dynamic, and inducible and can compete with protein phosphorylation in signal transduction. Inhibitors of O-GlcNAcase, the enzyme removing O-GlcNAc, are useful tools for studying the role of O-GlcNAc in a range of cellular processes. We report the discovery of nanomolar OGA inhibitors that are up to 900,000-fold selective over the related lysosomal hexosaminidases. When applied at nanomolar concentrations on live cells, these cell-penetrant molecules shift the O-GlcNAc equilibrium toward hyper-O-GlcNAcylation with EC₅₀ values down to 3 nM and are thus invaluable tools for the study of O-GlcNAc cell biology.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
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