2XND image
Deposition Date 2010-08-02
Release Date 2010-09-15
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2XND
Keywords:
Title:
Crystal structure of bovine F1-c8 sub-complex of ATP Synthase
Biological Source:
Source Organism:
BOS TAURUS (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.30
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL
Gene (Uniprot):ATP5F1A
Chain IDs:A, B, C
Chain Length:492
Number of Molecules:3
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL
Gene (Uniprot):ATP5F1B
Chain IDs:D, E, F
Chain Length:467
Number of Molecules:3
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL
Gene (Uniprot):ATP5F1C
Chain IDs:G
Chain Length:272
Number of Molecules:1
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL
Gene (Uniprot):ATP5F1D
Chain IDs:H
Chain Length:131
Number of Molecules:1
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL
Gene (Uniprot):ATP5F1E
Chain IDs:I
Chain Length:47
Number of Molecules:1
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL
Gene (Uniprot):ATP5MC1
Chain IDs:J, K, L, M, N, O, P, Q
Chain Length:72
Number of Molecules:8
Biological Source:BOS TAURUS
Primary Citation
Bioenergetic Cost of Making an Adenosine Triphosphate Molecule in Animal Mitochondria.
Proc.Natl.Acad.Sci.USA 107 16823 ? (2010)
PMID: 20847295 DOI: 10.1073/PNAS.1011099107

Abstact

The catalytic domain of the F-ATPase in mitochondria protrudes into the matrix of the organelle, and is attached to the membrane domain by central and peripheral stalks. Energy for the synthesis of ATP from ADP and phosphate is provided by the transmembrane proton-motive-force across the inner membrane, generated by respiration. The proton-motive force is coupled mechanically to ATP synthesis by the rotation at about 100 times per second of the central stalk and an attached ring of c-subunits in the membrane domain. Each c-subunit carries a glutamate exposed around the midpoint of the membrane on the external surface of the ring. The rotation is generated by protonation and deprotonation successively of each glutamate. Each 360° rotation produces three ATP molecules, and requires the translocation of one proton per glutamate by each c-subunit in the ring. In fungi, eubacteria, and plant chloroplasts, ring sizes of c(10)-c(15) subunits have been observed, implying that these enzymes need 3.3-5 protons to make each ATP, but until now no higher eukaryote has been examined. As shown here in the structure of the bovine F(1)-c-ring complex, the c-ring has eight c-subunits. As the sequences of c-subunits are identical throughout almost all vertebrates and are highly conserved in invertebrates, their F-ATPases probably contain c(8)-rings also. Therefore, in about 50,000 vertebrate species, and probably in many or all of the two million invertebrate species, 2.7 protons are required by the F-ATPase to make each ATP molecule.

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