2XB6 image
Deposition Date 2010-04-07
Release Date 2010-06-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2XB6
Keywords:
Title:
Revisited crystal structure of Neurexin1beta-Neuroligin4 complex
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
RATTUS NORVEGICUS (Taxon ID: 10116)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NEUROLIGIN-4, X-LINKED
Gene (Uniprot):NLGN4X
Chain IDs:A, B
Chain Length:588
Number of Molecules:2
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Molecule:NEUREXIN-1-BETA
Gene (Uniprot):Nrxn1
Chain IDs:C, D
Chain Length:179
Number of Molecules:2
Biological Source:RATTUS NORVEGICUS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Structural Insights Into the Exquisite Selectivity of Neurexin-Neuroligin Synaptic Interactions
Embo J. 29 2461 ? (2010)
PMID: 20543817 DOI: 10.1038/EMBOJ.2010.123

Abstact

The extracellular domains of neuroligins and neurexins interact through Ca(2+) to form flexible trans-synaptic associations characterized by selectivity for neuroligin or neurexin subtypes. This heterophilic interaction, essential for synaptic maturation and differentiation, is regulated by gene selection, alternative mRNA splicing and post-translational modifications. A new, 2.6 A-resolution crystal structure of a soluble neurexin-1beta-neuroligin-4 (Nrx1beta-NL4) complex permits a detailed description of the Ca(2+)-coordinated interface and unveils concerted positional rearrangements of several residues of NL4, not observed in neuroligin-1, associated with Nrx1beta binding. Surface plasmon resonance analysis of the binding of structure-guided Nrx1beta mutants towards NL4 and neuroligin-1 shows that flexibility of the Nrx1beta-binding site in NL4 is reflected in a greater dissociation constant of the complex and higher sensitivity to ionic strength and pH variations. Analysis of neuroligin mutants points to critical functions for two respective residues in neuroligin-1 and neuroligin-2 in governing the affinity of the complexes. Although neuroligin-1 and neuroligin-2 have pre-determined conformations that respectively promote and prevent Nrx1beta association, unique conformational reshaping of the NL4 surface is required to permit Nrx1beta association.

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Primary Citation of related structures