2X8U image
Deposition Date 2010-03-12
Release Date 2010-03-23
Last Version Date 2025-04-09
Entry Detail
PDB ID:
2X8U
Keywords:
Title:
Sphingomonas wittichii Serine palmitoyltransferase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SERINE PALMITOYLTRANSFERASE
Chain IDs:A, B
Chain Length:412
Number of Molecules:2
Biological Source:SPHINGOMONAS WITTICHII
Ligand Molecules
Primary Citation
The Serine Palmitoyltransferase from Sphingomonas Wittichii Rw1 an Interesting Link to an Unusual Acyl Carrier Protein
Biopolymers 93 811 ? (2010)
PMID: 20578000 DOI: 10.1002/BIP.21482

Abstact

Serine palmitoyltransferase (SPT) catalyses the first step in the de novo biosynthesis of sphingolipids (SLs). It uses a decarboxylative Claisen-like condensation reaction to couple L-serine with palmitoyl-CoA to generate a long-chain base product, 3-ketodihydrosphingosine. SLs are produced by mammals, plants, yeast, and some bacteria, and we have exploited the complete genome sequence of Sphingomonas wittichii to begin a complete analysis of bacterial sphingolipid biosynthesis. Here, we describe the enzymatic characterization of the SPT from this organism and present its high-resolution x-ray structure. Moreover, we identified an open reading frame with high sequence homology to acyl carrier proteins (ACPs) that are common to fatty acid biosynthetic pathways. This small protein was co-expressed with the SPT and we isolated and characterised the apo- and holo-forms of the ACP. Our studies suggest a link between fatty acid and sphingolipid metabolism.

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Primary Citation of related structures
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