2X7N image
Deposition Date 2010-03-02
Release Date 2010-03-31
Last Version Date 2024-05-08
Entry Detail
PDB ID:
2X7N
Title:
Mechanism of eIF6s anti-association activity
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
11.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:SARCIN-RICIN LOOP
Chain IDs:A
Chain Length:28
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EUKARYOTIC TRANSLATION INITIATION FACTOR 6
Gene (Uniprot):TIF6
Chain IDs:B
Chain Length:224
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S RIBOSOMAL PROTEIN L23
Chain IDs:C
Chain Length:132
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S RIBOSOMAL PROTEIN L24-A
Gene (Uniprot):RPL24A
Chain IDs:D
Chain Length:56
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Ligand Molecules
Primary Citation
Mechanism of Eif6-Mediated Inhibition of Ribosomal Subunit Joining.
J.Biol.Chem. 285 14848 ? (2010)
PMID: 20356839 DOI: 10.1074/JBC.C109.096057

Abstact

During the process of ribosomal assembly, the essential eukaryotic translation initiation factor 6 (eIF6) is known to act as a ribosomal anti-association factor. However, a molecular understanding of the anti-association activity of eIF6 is still missing. Here we present the cryo-electron microscopy reconstruction of a complex of the large ribosomal subunit with eukaryotic eIF6 from Saccharomyces cerevisiae. The structure reveals that the eIF6 binding site involves mainly rpL23 (L14p in Escherichia coli). Based on our structural data, we propose that the mechanism of the anti-association activity of eIF6 is based on steric hindrance of intersubunit bridge formation around the dynamic bridge B6.

Legend

Protein

Chemical

Disease

Primary Citation of related structures