2X7L image
Deposition Date 2010-03-01
Release Date 2010-03-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2X7L
Keywords:
Title:
Implications of the HIV-1 Rev dimer structure at 3.2A resolution for multimeric binding to the Rev response element
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.17 Å
R-Value Free:
0.25
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FAB HEAVY CHAIN
Chain IDs:A, C, E, G, H, J
Chain Length:231
Number of Molecules:6
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:FAB LIGHT CHAIN
Chain IDs:B, D, F, I, K, L
Chain Length:217
Number of Molecules:6
Biological Source:synthetic construct
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN REV
Gene (Uniprot):rev
Chain IDs:M, N, O, P, Q, R
Chain Length:115
Number of Molecules:6
Biological Source:HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10
Ligand Molecules
Primary Citation
Implications of the HIV-1 Rev Dimer Structure at 3. 2 A Resolution for Multimeric Binding to the Rev Response Element.
Proc.Natl.Acad.Sci.USA 107 5810 ? (2010)
PMID: 20231488 DOI: 10.1073/PNAS.0914946107

Abstact

HIV-1 Rev is a small regulatory protein that mediates the nuclear export of viral mRNAs, an essential step in the HIV replication cycle. In this process Rev oligomerizes in association with a highly structured RNA motif, the Rev response element. Crystallographic studies of Rev have been hampered by the protein's tendency to aggregate, but Rev has now been found to form a stable soluble equimolar complex with a specifically engineered monoclonal Fab fragment. We have determined the structure of this complex at 3.2 A resolution. It reveals a molecular dimer of Rev, bound on either side by a Fab, where the ordered portion of each Rev monomer (residues 9-65) contains two coplanar alpha-helices arranged in hairpin fashion. Subunits dimerize through overlapping of the hairpin prongs. Mating of hydrophobic patches on the outer surface of the dimer is likely to promote higher order interactions, suggesting a model for Rev oligomerization onto the viral RNA.

Legend

Protein

Chemical

Disease

Primary Citation of related structures