2X6N image
Deposition Date 2010-02-18
Release Date 2010-08-11
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2X6N
Keywords:
Title:
Human foamy virus integrase - catalytic core. Manganese-bound structure.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.06 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:INTEGRASE
Gene (Uniprot):pol
Mutations:YES
Chain IDs:A, B, C, D, E, F
Chain Length:200
Number of Molecules:6
Biological Source:HUMAN SPUMARETROVIRUS
Ligand Molecules
Primary Citation
Structural Studies of the Catalytic Core of the Primate Foamy Virus (Pfv-1) Integrase
Acta Crystallogr.,Sect.F 66 881 ? (2010)
PMID: 20693659 DOI: 10.1107/S1744309110022852

Abstact

Retroviral integrases are vital enzymes in the viral life cycle and thus are important targets for antiretroviral drugs. The structure of the catalytic core domain of the integrase from human foamy virus, which is related to HIV-1, has been solved. The structure of the protein is presented in two different crystal forms, each containing several molecules in the asymmetric unit, with and without the essential manganese or magnesium ion, and the structures are compared in detail. This allows regions of high structural variability to be pinpointed, as well as the effect of divalent cations on the conformation of the catalytic site.

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Primary Citation of related structures