2X5I image
Entry Detail
PDB ID:
2X5I
Keywords:
Title:
Crystal structure echovirus 7
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2010-02-08
Release Date:
2010-12-22
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:VP1
Chain IDs:A
Chain Length:292
Number of Molecules:1
Biological Source:HUMAN ECHOVIRUS 7
Polymer Type:polypeptide(L)
Description:VP2
Chain IDs:B
Chain Length:260
Number of Molecules:1
Biological Source:HUMAN ECHOVIRUS 7
Polymer Type:polypeptide(L)
Description:VP3
Chain IDs:C
Chain Length:238
Number of Molecules:1
Biological Source:HUMAN ECHOVIRUS 7
Polymer Type:polypeptide(L)
Description:VP4
Chain IDs:D
Chain Length:70
Number of Molecules:1
Biological Source:HUMAN ECHOVIRUS 7
Ligand Molecules
Primary Citation
Interaction of Decay-Accelerating Factor with Echovirus 7.
J.Virol. 84 12665 ? (2010)
PMID: 20881044 DOI: 10.1128/JVI.00837-10

Abstact

Echovirus 7 (EV7) belongs to the Enterovirus genus within the family Picornaviridae. Many picornaviruses use IgG-like receptors that bind in the viral canyon and are required to initiate viral uncoating during infection. However, in addition, some of the enteroviruses use an alternative or additional receptor that binds outside the canyon. Decay-accelerating factor (DAF) has been identified as a cellular receptor for EV7. The crystal structure of EV7 has been determined to 3.1-Å resolution and used to interpret the 7.2-Å-resolution cryo-electron microscopy reconstruction of EV7 complexed with DAF. Each DAF binding site on EV7 is near a 2-fold icosahedral symmetry axis, which differs from the binding site of DAF on the surface of coxsackievirus B3, indicating that there are independent evolutionary processes by which DAF was selected as a picornavirus accessory receptor. This suggests that there is an advantage for these viruses to recognize DAF during the initial process of infection.

Legend

Protein

Chemical

Disease

Primary Citation of related structures