2X0Y image
Deposition Date 2009-12-18
Release Date 2010-01-12
Last Version Date 2023-12-20
Entry Detail
PDB ID:
2X0Y
Keywords:
Title:
Screening-based discovery of drug-like O-GlcNAcase inhibitor scaffolds
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:O-GLCNACASE NAGJ
Gene (Uniprot):nagJ
Chain IDs:A, B
Chain Length:594
Number of Molecules:2
Biological Source:CLOSTRIDIUM PERFRINGENS
Ligand Molecules
Primary Citation
Screening-Based Discovery of Drug-Like O-Glcnacase Inhibitor Scaffolds
FEBS Lett. 584 694 ? (2010)
PMID: 20026047 DOI: 10.1016/J.FEBSLET.2009.12.020

Abstact

O-GlcNAcylation is an essential posttranslational modification in metazoa. Modulation of O-GlcNAc levels with small molecule inhibitors of O-GlcNAc hydrolase (OGA) is a useful strategy to probe the role of this modification in a range of cellular processes. Here we report the discovery of novel, low molecular weight and drug-like O-GlcNAcase inhibitor scaffolds by high-throughput screening. Kinetic and X-ray crystallographic analyses of the binding modes with human/bacterial O-GlcNAcases identify some of these as competitive inhibitors. Comparative kinetic experiments with the mechanistically related human lysosomal hexosaminidases reveal that three of the inhibitor scaffolds show selectivity towards human OGA. These scaffolds provide attractive starting points for the development of non-carbohydrate, drug-like OGA inhibitors.

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Chemical

Disease

Primary Citation of related structures
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