2WZP image
Deposition Date 2009-12-01
Release Date 2010-02-16
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2WZP
Keywords:
Title:
Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PUTATIVE RECEPTOR BINDING PROTEIN
Chain IDs:A, B, C, G, H, I
Chain Length:266
Number of Molecules:6
Biological Source:LACTOCOCCUS PHAGE P2
Polymer Type:polypeptide(L)
Molecule:CAMELID VHH5
Chain IDs:D, E, F, J, K, L
Chain Length:123
Number of Molecules:6
Biological Source:LAMA GLAMA
Polymer Type:polypeptide(L)
Molecule:LACTOCOCCAL PHAGE P2 ORF15
Chain IDs:M (auth: P), N (auth: Q)
Chain Length:326
Number of Molecules:2
Biological Source:LACTOCOCCUS PHAGE P2
Polymer Type:polypeptide(L)
Molecule:LACTOCOCCAL PHAGE P2 ORF16
Chain IDs:O (auth: R)
Chain Length:375
Number of Molecules:1
Biological Source:LACTOCOCCUS PHAGE P2
Primary Citation
Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA 107 6852 ? (2010)
PMID: 20351260 DOI: 10.1073/PNAS.1000232107

Abstact

Siphoviridae is the most abundant viral family on earth which infects bacteria as well as archaea. All known siphophages infecting gram+ Lactococcus lactis possess a baseplate at the tip of their tail involved in host recognition and attachment. Here, we report analysis of the p2 phage baseplate structure by X-ray crystallography and electron microscopy and propose a mechanism for the baseplate activation during attachment to the host cell. This approximately 1 MDa, Escherichia coli-expressed baseplate is composed of three protein species, including six trimers of the receptor-binding protein (RBP). RBPs host-recognition domains point upwards, towards the capsid, in agreement with the electron-microscopy map of the free virion. In the presence of Ca(2+), a cation mandatory for infection, the RBPs rotated 200 degrees downwards, presenting their binding sites to the host, and a channel opens at the bottom of the baseplate for DNA passage. These conformational changes reveal a novel siphophage activation and host-recognition mechanism leading ultimately to DNA ejection.

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Primary Citation of related structures