2WW6 image
Deposition Date 2009-10-22
Release Date 2010-09-29
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2WW6
Keywords:
Title:
foldon containing D-amino acids in turn positions
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
0.98 Å
R-Value Free:
0.14
R-Value Work:
0.12
R-Value Observed:
0.12
Space Group:
P 32
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FIBRITIN
Gene (Uniprot):wac
Chain IDs:A, B, C
Chain Length:27
Number of Molecules:3
Biological Source:ENTEROBACTERIA PHAGE T4
Ligand Molecules
Primary Citation
Structural Characterization of a Beta-Turn Mimic within a Protein-Protein Interface.
Proc.Natl.Acad.Sci.USA 107 18336 ? (2010)
PMID: 20937907 DOI: 10.1073/PNAS.1004187107

Abstact

β-Turns are secondary structure elements not only exposed on protein surfaces, but also frequently found to be buried in protein-protein interfaces. Protein engineering so far considered mainly the backbone-constraining properties of synthetic β-turn mimics as parts of surface-exposed loops. A β-turn mimic, Hot═Tap, that is available in gram amounts, provides two hydroxyl groups that enhance its turn-inducing properties besides being able to form side-chain-like interactions. NMR studies on cyclic hexapeptides harboring the Hot═Tap dipeptide proved its strong β-turn-inducing capability. Crystallographic analyses of the trimeric fibritin-foldon/Hot═Tap hybrid reveal at atomic resolution how Hot═Tap replaces a βI'-turn by a βII'-type structure. Furthermore, Hot═Tap adapts to the complex protein environment by participating in several direct and water-bridged interactions across the foldon trimer interface. As building blocks, β-turn mimics capable of both backbone and side-chain mimicry may simplify the design of synthetic proteins.

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Primary Citation of related structures