2WUH image
Entry Detail
PDB ID:
2WUH
Title:
Crystal structure of the DDR2 discoidin domain bound to a triple- helical collagen peptide
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-10-05
Release Date:
2009-12-29
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DISCOIDIN DOMAIN RECEPTOR 2
Chain IDs:A
Chain Length:178
Number of Molecules:1
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Description:COLLAGEN PEPTIDE
Chain IDs:B, C, D
Chain Length:29
Number of Molecules:3
Biological Source:HOMO SAPIENS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HYP B PRO 4-HYDROXYPROLINE
NLE B LEU NORLEUCINE
Primary Citation

Abstact

The discoidin domain receptors, DDR1 and DDR2, are widely expressed receptor tyrosine kinases that are activated by triple-helical collagen. They control important aspects of cell behavior and are dysregulated in several human diseases. The major DDR2-binding site in collagens I-III is a GVMGFO motif (O is hydroxyproline) that also binds the matricellular protein SPARC. We have determined the crystal structure of the discoidin domain of human DDR2 bound to a triple-helical collagen peptide. The GVMGFO motifs of two collagen chains are recognized by an amphiphilic pocket delimited by a functionally critical tryptophan residue and a buried salt bridge. Collagen binding results in structural changes of DDR2 surface loops that may be linked to the process of receptor activation. A comparison of the GVMGFO-binding sites of DDR2 and SPARC reveals a striking case of convergent evolution in collagen recognition.

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Primary Citation of related structures